How we do it

The Lab

To be written

Our animal models

To be written

R2OBBIE

To be written

Softwares

  • MetaPIGA v3.1

    MetaPIGA is a versatile and easy-to-use software that implements robust  stochastic heuristics (including the Metapopulation Genetic Algorithm,  metaGA) for large phylogeny inference under maximum likelihood. MetaPIGA  allows analyses of binary and molecular data sets under multiple  substitution models, Gamma rate heterogeneity, and data partitioning.   The software is for all types of users as it can be run through an  extensive and ergonomic graphical interface, or by using batch files and  console interface on your local machine or on distant servers.  MetaPIGA  is platform independent, and easily takes advantage of GPU and  multicore computing.

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  • LANE runner

    A JAVA application developed to facilitate the annotation of de novo  sequenced transcriptomes. It was extensively used for the Reptilian  Brain Transcriptome project (Tzika et al.2011) and for building the  subsequent Reptilian Transcriptomes 2.0 database (Tzika et al. 2015).

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